Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
motBFlagellar motor rotation protein MotB. (342 aa)    
Predicted Functional Partners:
motA
Flagellar motor rotation protein MotA.
 
 0.996
cheA
Signal transduction histidine kinase CheA.
 
  
 0.958
CSIRO_0514
MotA/TolQ/ExbB proton channel family protein; Probably associated with flagella.
 
     0.955
cheW
Regulator of CheA protein activity CheW.
 
  
 0.902
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.886
CSIRO_1038
OmpA/MotB.
    
 0.875
motB-2
Flagellar motor rotation protein MotB.
  
  
 0.872
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.868
CSIRO_2320
Putative outer membrane protein.
  
 
 0.853
CSIRO_0516
GCN5-related N-acetyltransferase.
       0.837
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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