STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0568Na+/H+ antiporter NhaD-like protein. (468 aa)    
Predicted Functional Partners:
CSIRO_0569
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.679
CSIRO_0275
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.614
CSIRO_1360
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
 0.614
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
    0.579
CSIRO_0570
Hypothetical protein.
       0.515
CSIRO_0277
Arsenate reductase.
    
 0.444
CSIRO_2568
Glutathione-dependent thiol reductase; Belongs to the ArsC family.
    
 0.444
rpsF
SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.
   
    0.412
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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