Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chvGSensor histidine kinase ChvG. (605 aa)    
Predicted Functional Partners:
chvI
DNA-binding response regulator ChvI.
 
 0.990
CSIRO_2365
Sensory box histidine kinase/response regulator.
  
 0.984
CSIRO_2812
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.937
CSIRO_4108
Hypothetical protein.
  
 0.910
CSIRO_0583
HPr kinase.
 
     0.865
CSIRO_1996
Two-component response regulator.
 
 0.864
petR
DNA-binding response regulator PetR.
 
 0.822
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
 
 0.822
CSIRO_2398
Two-component response regulator.
 
 0.809
CSIRO_4253
Two-component cell cycle transcriptional regulator.
 
 0.809
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (16%) [HD]