STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0591Murein endopeptidase. (296 aa)    
Predicted Functional Partners:
CSIRO_0382
Protein of unknown function DUF882.
  
     0.719
CSIRO_4282
YcjX-like protein.
  
     0.579
CSIRO_4283
Hypothetical protein.
  
     0.571
modC
Molybdenum transport ATP-binding protein ModC; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
 
     0.554
modA
Molybdenum ABC transporter molybdenum-binding protein ModA; Periplasmic.
 
     0.538
modB
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
     0.529
CSIRO_0762
Hypothetical protein.
  
     0.518
CSIRO_1815
Hypothetical protein.
  
     0.473
CSIRO_4140
ErfK/YbiS/YcfS/YnhG-like protein.
  
     0.472
CSIRO_2669
Hypothetical protein.
  
     0.464
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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