Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_0596Vitamin B12 ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (340 aa)    
Predicted Functional Partners:
CSIRO_0597
ABC transporter-like protein.
 
 0.993
CSIRO_0595
Vitamin B12 ABC transporter, B12-binding component.
 
 0.969
CSIRO_0574
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component.
 
 0.962
hmuV
ABC-type hemin transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 0.962
CSIRO_2159
Periplasmic hemin-binding protein.
 
 0.913
CSIRO_0576
Periplasmic binding protein.
 
 0.889
CSIRO_3424
Periplasmic binding protein.
 
 0.809
CSIRO_4010
ABC transporter permease protein.
  
  
  0.613
znuC
Zinc ABC transporter ATP-binding protein ZnuC.
     
 0.604
CSIRO_0347
Ferric iron ABC transporter permease protein.
     
 0.599
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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