STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0597ABC transporter-like protein. (261 aa)    
Predicted Functional Partners:
CSIRO_0596
Vitamin B12 ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.998
CSIRO_0575
Vitamin B12 ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.990
CSIRO_2158
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.990
CSIRO_0595
Vitamin B12 ABC transporter, B12-binding component.
 
 0.974
CSIRO_0576
Periplasmic binding protein.
 
 0.908
CSIRO_2159
Periplasmic hemin-binding protein.
 
 0.889
CSIRO_3424
Periplasmic binding protein.
 
 0.824
CSIRO_3225
Putative high-affinity iron permease.
   
  
 0.573
hisC
Biosynthetic aromatic amino acid aminotransferase beta; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.569
znuB
Zinc ABC transporter inner membrane permease protein ZnuB.
    
 0.514
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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