Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_0607Creatinine amidohydrolase. (272 aa)    
Predicted Functional Partners:
CSIRO_2009
Cytosine deaminase.
    
 0.799
CSIRO_0606
Hydroxymethylpyrimidine ABC transporter, substrate-binding component.
 
     0.781
CSIRO_0605
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
     0.694
CSIRO_0604
Transport system inner membrane component.
 
     0.683
CSIRO_4056
Xaa-Pro aminopeptidase.
    
  0.648
tadA-2
tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
     
  0.643
CSIRO_1283
Putative glycosyl transferase.
  
  
 0.625
CSIRO_2277
Phytoene synthase.
  
  
 0.625
CSIRO_2883
Beta-(1-3)-glucosyl transferase.
  
  
 0.625
CSIRO_0608
Hypothetical protein.
       0.599
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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