Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0617Hypothetical protein. (245 aa)    
Predicted Functional Partners:
CSIRO_3007
S-adenosyl-L-methionine dependent methyltransferase.
  
 0.984
CSIRO_0618
Amine oxidase.
 
  
 0.959
CSIRO_2604
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.952
CSIRO_0621
Cyclopropane-fatty-acyl-phospholipid synthase-like protein.
 
  
 0.894
CSIRO_0620
Hypothetical protein.
 
     0.861
CSIRO_4041
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.721
CSIRO_0622
Hypothetical protein.
 
     0.594
CSIRO_3416
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
   
 0.523
CSIRO_0619
Hypothetical protein.
       0.414
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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