STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0618Amine oxidase. (448 aa)    
Predicted Functional Partners:
CSIRO_3007
S-adenosyl-L-methionine dependent methyltransferase.
 
 0.983
CSIRO_2604
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.952
CSIRO_0617
Hypothetical protein.
 
  
 0.937
CSIRO_4041
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.926
CSIRO_0620
Hypothetical protein.
    0.923
CSIRO_0621
Cyclopropane-fatty-acyl-phospholipid synthase-like protein.
 
 
 0.883
ctaG
Cytochrome oxidase biogenesis protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
      0.877
CSIRO_0622
Hypothetical protein.
 
     0.543
CSIRO_0619
Hypothetical protein.
       0.493
CSIRO_3416
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
   
 0.486
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.