STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0635Peptidase. (472 aa)    
Predicted Functional Partners:
CSIRO_0634
Hypothetical protein.
 
     0.673
CSIRO_0150
Hypothetical protein.
  
     0.652
CSIRO_0241
Hypothetical protein.
  
     0.631
CSIRO_3303
Hypothetical protein.
  
     0.629
CSIRO_3812
Hypothetical protein.
  
     0.612
CSIRO_1646
Putative membrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.593
CSIRO_2347
Hypothetical protein.
  
     0.581
CSIRO_2452
Hypothetical protein.
  
     0.566
CSIRO_3331
Putative outer membrane protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.558
CSIRO_1316
Signal recognition particle GTPase.
  
     0.529
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.