Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phbFPhbF. (199 aa)    
Predicted Functional Partners:
CSIRO_3138
Polyhydroxyalkanoic acid synthase.
 
   
 0.841
CSIRO_2237
Polyhydroxyalkanoic acid synthase.
 
   
 0.702
CSIRO_1218
Polyhydroxyalkanoate depolymerase.
 
   
 0.675
CSIRO_0720
Hypothetical protein.
 
   
 0.644
CSIRO_0681
acetoacetyl-CoA reductase.
 
   
 0.621
CSIRO_0697
Ferredoxin reductase.
 
     0.580
CSIRO_0682
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.565
CSIRO_3382
Hypothetical protein.
 
   
 0.518
CSIRO_1359
Hypothetical protein; Belongs to the UPF0262 family.
  
     0.429
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.