Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CSIRO_0714Cation/multidrug efflux pump. (182 aa)    
Predicted Functional Partners:
CSIRO_0034
Hypothetical protein.
  
  
  0.674
CSIRO_1946
4-carboxymuconolactone decarboxylase.
    
 0.668
CSIRO_3656
Beta-ketoadipate enol-lactone hydrolase.
    
 0.664
CSIRO_3654
3-carboxy-cis,cis-muconate cycloisomerase.
     
  0.657
CSIRO_0715
Glyoxalase family protein.
       0.627
cysC
Sulfate adenylyltransferase subunit 1/ adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
   
    0.566
CSIRO_0713
acyl-CoA dehydrogenase family protein.
       0.536
CSIRO_3670
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.527
CSIRO_3330
Alpha/beta hydrolase fold-containing protein.
  
  
  0.491
CSIRO_3655
Hypothetical lactonase in carbon monoxide dehydrogenase cluster.
     
  0.476
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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