STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0715Glyoxalase family protein. (170 aa)    
Predicted Functional Partners:
CSIRO_4185
Glyoxalase family protein.
  
  
  0.717
CSIRO_1851
Glyoxalase family protein.
  
  
  0.683
CSIRO_2127
Putative 3-(3-hydroxy-phenyl)propionate hydroxylase.
    
 0.652
CSIRO_0246
Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family.
    
 0.631
CSIRO_3407
Hypothetical protein; Belongs to the 4-oxalocrotonate tautomerase family.
    
 0.631
CSIRO_0714
Cation/multidrug efflux pump.
       0.624
CSIRO_0713
acyl-CoA dehydrogenase family protein.
  
 
  0.592
CSIRO_0168
L-lactate dehydrogenase.
    
 0.565
CSIRO_0712
acyl-CoA dehydrogenase family protein.
  
 
  0.485
CSIRO_3810
Ferredoxin.
    
 0.469
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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