STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0768UDP forming alpha-trehalose-phosphate synthase. (498 aa)    
Predicted Functional Partners:
CSIRO_0770
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 
 0.994
CSIRO_0769
Glucoamylase.
 
  
 0.956
CSIRO_2957
Maltodextrin glucosidase.
 
 
 0.787
CSIRO_3262
Hypothetical protein.
    
 0.720
CSIRO_0280
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.697
CSIRO_1144
HAD-superfamily hydrolase subfamily IA, variant 3.
    
 0.679
gpsA
Glycerol-3-phosphate dehydrogenase (NADP+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.649
CSIRO_1283
Putative glycosyl transferase.
  
 
  0.621
CSIRO_2883
Beta-(1-3)-glucosyl transferase.
  
 
  0.615
CSIRO_3186
Mechanosensitive ion channel family protein.
 
   
 0.524
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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