STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0769Glucoamylase. (612 aa)    
Predicted Functional Partners:
CSIRO_0770
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.980
CSIRO_0768
UDP forming alpha-trehalose-phosphate synthase.
 
  
 0.956
CSIRO_0771
Putative sugar transport protein.
       0.791
CSIRO_2957
Maltodextrin glucosidase.
 
  
 0.786
CSIRO_0785
Hypothetical protein.
  
 
  0.662
CSIRO_1144
HAD-superfamily hydrolase subfamily IA, variant 3.
     
 0.620
CSIRO_2833
Beta N-acetyl-glucosaminidase.
  
 
  0.609
CSIRO_1652
Polysialic acid capsule sugar isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
    
  0.455
CSIRO_3364
Tnosine-5'-monophosphate dehydrogenase.
    
  0.455
CSIRO_3186
Mechanosensitive ion channel family protein.
 
    0.436
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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