Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_0797Peptidase M23B precursor. (477 aa)    
Predicted Functional Partners:
CSIRO_0798
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
 
  
 0.943
ftsX
Cell division protein FtsX.
 
 
 
 0.922
CSIRO_3171
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.911
ftsE
ATP-binding protein FtsE.
 
 
 
 0.884
rlmH
LSU methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
 
     0.835
CSIRO_1763
Hypothetical protein.
 
 
   0.773
CSIRO_3175
Hypothetical protein.
 
 
   0.764
CSIRO_2365
Sensory box histidine kinase/response regulator.
    
  0.725
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.711
CSIRO_3180
Putative two-component sensor histidine kinase.
    
  0.706
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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