Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0809Hypothetical protein. (223 aa)    
Predicted Functional Partners:
CSIRO_3668
Hypothetical protein.
  
     0.771
CSIRO_4095
Hypothetical protein.
  
     0.763
xerC
Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.759
CSIRO_1312
Hypothetical protein.
  
     0.751
CSIRO_4264
Hypothetical protein.
  
     0.747
CSIRO_2318
Hypothetical protein.
  
     0.733
CSIRO_1757
Hypothetical protein.
  
     0.725
CSIRO_1028
Putative exported protein.
  
     0.718
CSIRO_2403
Hypothetical protein.
  
     0.714
CSIRO_1114
Hypothetical protein.
  
     0.710
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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