STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0823Putative inner membrane protein. (855 aa)    
Predicted Functional Partners:
yvcR
ABC transporter ATP-binding protein YvcR.
 
  
  0.961
CSIRO_0821
Arylesterase precursor.
 
     0.906
CSIRO_0545
Putative acyl-CoA thioesterase precursor.
 
     0.781
CSIRO_2198
AttH component of AttEFGH ABC transport system.
  
  
 0.540
CSIRO_2196
AttE component of AttEFGH ABC transport system.
  
 
 0.522
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.522
CSIRO_0824
Membrane protein; Belongs to the BI1 family.
       0.509
CSIRO_0820
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.470
CSIRO_3369
ATP/GTP-binding site motif A.
  
     0.440
CSIRO_0878
Hypothetical protein.
  
     0.429
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.