STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0826Hypothetical protein. (122 aa)    
Predicted Functional Partners:
CSIRO_0827
Hypothetical protein that often co-occurs with aconitase.
 
     0.693
CSIRO_1669
Hypothetical protein.
  
     0.679
gcrA
Cell cycle regulator GcrA.
  
     0.661
CSIRO_3694
Putative purine biosynthesis protein.
  
     0.658
CSIRO_1357
Hypothetical protein.
  
     0.636
CSIRO_2904
Hypothetical protein.
 
     0.629
CSIRO_1267
Deoxycytidine triphosphate deaminase.
  
     0.621
CSIRO_0987
Hypothetical protein.
  
     0.594
prrB
Sensor histidine kinase PrrB.
  
     0.590
CSIRO_1787
Putative hydrolase.
  
     0.566
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.