STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpfRibosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (207 aa)    
Predicted Functional Partners:
rpmC
LSU ribosomal protein L29p; Belongs to the universal ribosomal protein uL29 family.
  
 
 
 0.975
rpsU
Ribosomal protein S21p; Belongs to the bacterial ribosomal protein bS21 family.
 
 
 
 0.974
rpmH
LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.
   
 
 0.967
rplU
LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
 
   0.967
rpmA
LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.967
rpsT
SSU ribosomal protein S20p; Binds directly to 16S ribosomal RNA.
  
 
   0.967
rpsI
SSU ribosomal protein S9p; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.967
rpsP
SSU ribosomal protein S16p; Belongs to the bacterial ribosomal protein bS16 family.
    
 
 0.965
rplI
LSU ribosomal protein L9p; Binds to the 23S rRNA.
  
   0.965
rplO
LSU ribosomal protein L15p; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.965
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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