ku-2 protein (Bradyrhizobiaceae bacterium SG6C)

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ku-2

Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (316 aa)

Predicted Functional Partners:

CSIRO_1818

0.964

CSIRO_0993

0.669

CSIRO_1104

0.616

CSIRO_1545

0.546

CSIRO_4046

0.546

CSIRO_3635

0.522

CSIRO_0911

0.496

CSIRO_1293

0.457

CSIRO_2298

0.438

CSIRO_3802

0.438

Your Current Organism:

Bradyrhizobiaceae bacterium SG6C

NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSIRO_0911	ku-2	CSIRO_0911	CSIRO_0912	Hypothetical protein.	Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.496
CSIRO_0993	CSIRO_1293	CSIRO_0993	CSIRO_1293	DNA topoisomerase IB.	ATP-dependent DNA ligaseLigC.	0.558
CSIRO_0993	CSIRO_1818	CSIRO_0993	CSIRO_1818	DNA topoisomerase IB.	ATP-dependent DNA ligase.	0.820
CSIRO_0993	ku-2	CSIRO_0993	CSIRO_0912	DNA topoisomerase IB.	Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.669
CSIRO_1104	CSIRO_1545	CSIRO_1104	CSIRO_1545	ATP-dependent nuclease subunit B.	Hypothetical protein.	0.875
CSIRO_1104	CSIRO_4046	CSIRO_1104	CSIRO_4046	ATP-dependent nuclease subunit B.	ATP-dependent DNA helicase UvrD/PcrA.	0.890
CSIRO_1104	ku-2	CSIRO_1104	CSIRO_0912	ATP-dependent nuclease subunit B.	Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.616
CSIRO_1293	CSIRO_0993	CSIRO_1293	CSIRO_0993	ATP-dependent DNA ligaseLigC.	DNA topoisomerase IB.	0.558
CSIRO_1293	CSIRO_1818	CSIRO_1293	CSIRO_1818	ATP-dependent DNA ligaseLigC.	ATP-dependent DNA ligase.	0.732
CSIRO_1293	ku-2	CSIRO_1293	CSIRO_0912	ATP-dependent DNA ligaseLigC.	Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.457
CSIRO_1545	CSIRO_1104	CSIRO_1545	CSIRO_1104	Hypothetical protein.	ATP-dependent nuclease subunit B.	0.875
CSIRO_1545	ku-2	CSIRO_1545	CSIRO_0912	Hypothetical protein.	Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.546
CSIRO_1818	CSIRO_0993	CSIRO_1818	CSIRO_0993	ATP-dependent DNA ligase.	DNA topoisomerase IB.	0.820
CSIRO_1818	CSIRO_1293	CSIRO_1818	CSIRO_1293	ATP-dependent DNA ligase.	ATP-dependent DNA ligaseLigC.	0.732
CSIRO_1818	CSIRO_2298	CSIRO_1818	CSIRO_2298	ATP-dependent DNA ligase.	Protein of unknown function DUF892.	0.609
CSIRO_1818	CSIRO_3635	CSIRO_1818	CSIRO_3635	ATP-dependent DNA ligase.	Hypothetical protein.	0.749
CSIRO_1818	CSIRO_3802	CSIRO_1818	CSIRO_3802	ATP-dependent DNA ligase.	Hypothetical protein.	0.604
CSIRO_1818	ku-2	CSIRO_1818	CSIRO_0912	ATP-dependent DNA ligase.	Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.964
CSIRO_2298	CSIRO_1818	CSIRO_2298	CSIRO_1818	Protein of unknown function DUF892.	ATP-dependent DNA ligase.	0.609
CSIRO_2298	ku-2	CSIRO_2298	CSIRO_0912	Protein of unknown function DUF892.	Ku domain-containing protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.438

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