STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0918ComM-like protein. (298 aa)    
Predicted Functional Partners:
CSIRO_0906
ComM-like protein.
 
     0.976
smf
Rossmann fold nucleotide-binding protein Smf.
 
 0.819
CSIRO_0662
Competence protein F-like protein.
 
  
 0.746
CSIRO_0900
Endonuclease; Belongs to the UPF0102 family.
 
  
 0.728
CSIRO_0917
Site-specific recombinase.
       0.546
CSIRO_3510
Hypothetical protein.
     
 0.542
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.486
CSIRO_0919
Hypothetical protein.
       0.440
flgF
Flagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family.
   
   0.408
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.