Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_0921Hypothetical protein. (342 aa)    
Predicted Functional Partners:
CSIRO_0185
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.932
CSIRO_0920
Two-component hybrid sensor and regulator.
       0.688
CSIRO_2755
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.584
plsY
Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
  0.578
CSIRO_0919
Hypothetical protein.
       0.507
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.479
CSIRO_3822
Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase-like protein.
 
    0.478
CSIRO_0060
Hypothetical protein.
  
     0.474
CSIRO_2593
Colicin V production protein.
  
     0.466
petP
HTH-type transcriptional regulator PetP.
  
     0.410
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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