Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_0946Cobyrinic acid a,c-diamide synthase. (288 aa)    
Predicted Functional Partners:
parB
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 
 0.977
gidB
rRNA small subunit methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
 
  
 0.875
CSIRO_1283
Putative glycosyl transferase.
  
 
 0.850
gidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.769
ftsK
Cell division protein FtsK.
  
  
 0.705
CSIRO_0753
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.695
cobS
Aerobic cobaltochelatase, CobS subunit.
    
 0.653
CSIRO_0113
Hypothetical protein.
  
 
 0.645
CSIRO_4195
DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.645
cobT
Aerobic cobaltochelatase, CobT subunit.
     
  0.644
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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