Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CSIRO_0647 | CSIRO_1103 | CSIRO_0647 | CSIRO_1103 | DnaJ-like domain-containing protein. | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | 0.511 |
| CSIRO_0647 | CSIRO_1104 | CSIRO_0647 | CSIRO_1104 | DnaJ-like domain-containing protein. | ATP-dependent nuclease subunit B. | 0.732 |
| CSIRO_0647 | lolA | CSIRO_0647 | CSIRO_0957 | DnaJ-like domain-containing protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.687 |
| CSIRO_0647 | lptD | CSIRO_0647 | CSIRO_2628 | DnaJ-like domain-containing protein. | Outer membrane protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.567 |
| CSIRO_1103 | CSIRO_0647 | CSIRO_1103 | CSIRO_0647 | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | DnaJ-like domain-containing protein. | 0.511 |
| CSIRO_1103 | CSIRO_1104 | CSIRO_1103 | CSIRO_1104 | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | ATP-dependent nuclease subunit B. | 0.970 |
| CSIRO_1103 | lolA | CSIRO_1103 | CSIRO_0957 | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.693 |
| CSIRO_1103 | lptD | CSIRO_1103 | CSIRO_2628 | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | Outer membrane protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.465 |
| CSIRO_1104 | CSIRO_0647 | CSIRO_1104 | CSIRO_0647 | ATP-dependent nuclease subunit B. | DnaJ-like domain-containing protein. | 0.732 |
| CSIRO_1104 | CSIRO_1103 | CSIRO_1104 | CSIRO_1103 | ATP-dependent nuclease subunit B. | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | 0.970 |
| CSIRO_1104 | lolA | CSIRO_1104 | CSIRO_0957 | ATP-dependent nuclease subunit B. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.795 |
| CSIRO_1104 | lptD | CSIRO_1104 | CSIRO_2628 | ATP-dependent nuclease subunit B. | Outer membrane protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.569 |
| CSIRO_2196 | lolA | CSIRO_2196 | CSIRO_0957 | AttE component of AttEFGH ABC transport system. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.921 |
| CSIRO_2196 | lolE | CSIRO_2196 | CSIRO_2744 | AttE component of AttEFGH ABC transport system. | Lipoprotein releasing system transmembrane protein LolE. | 0.994 |
| CSIRO_3165 | lolA | CSIRO_3165 | CSIRO_0957 | Hypothetical protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.662 |
| CSIRO_3165 | lptD | CSIRO_3165 | CSIRO_2628 | Hypothetical protein. | Outer membrane protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.662 |
| CSIRO_3171 | lolA | CSIRO_3171 | CSIRO_0957 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.940 |
| ftsK | lolA | CSIRO_0958 | CSIRO_0957 | Cell division protein FtsK. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.674 |
| lolA | CSIRO_0647 | CSIRO_0957 | CSIRO_0647 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DnaJ-like domain-containing protein. | 0.687 |
| lolA | CSIRO_1103 | CSIRO_0957 | CSIRO_1103 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ATP-dependent nuclease subunit A; Belongs to the helicase family. UvrD subfamily. | 0.693 |
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