Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_0975Short-chain dehydrogenase. (238 aa)    
Predicted Functional Partners:
CSIRO_2214
Putative oxidoreductase.
  
  
  0.643
CSIRO_0626
Putative oxidoreductase.
  
  
  0.638
CSIRO_3245
Glutathione-dependent 2-hydroxychromene-2-carboxylate isomerase family protein.
 
     0.638
CSIRO_2425
Biotin carboxylase.
   
 
  0.632
CSIRO_1156
Putative reductase.
  
  
  0.631
CSIRO_2479
Acyl carrier protein.
    
 0.579
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.579
CSIRO_2220
Short-chain alcohol dehydrogenase-like dehydrogenase.
  
  
  0.543
CSIRO_0976
ABC transporter substrate-binding protein.
       0.538
CSIRO_1250
2-deoxy-D-gluconate 3-dehydrogenase.
  
  
  0.527
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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