Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1015Hypothetical protein. (407 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
     
  0.759
CSIRO_3898
Hypothetical protein.
 
 
 0.661
CSIRO_2231
Hypothetical protein.
 
 
 0.635
CSIRO_0434
Hypothetical protein.
 
 
 0.633
CSIRO_0321
Putative beta-ketoadipate enol-lactone hydrolase.
 
 
 0.625
CSIRO_1353
Putative hydrolase.
 
 
 0.624
CSIRO_1412
Haloalkane dehalogenase.
 
 
 0.624
CSIRO_2812
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
  0.620
CSIRO_0034
Hypothetical protein.
  
 
 0.574
CSIRO_0389
Putative esterase.
  
 
 0.574
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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