STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1032Hypothetical protein. (221 aa)    
Predicted Functional Partners:
CSIRO_0999
HemY-like protein.
  
     0.668
CSIRO_0634
Hypothetical protein.
  
     0.617
CSIRO_3165
Hypothetical protein.
  
     0.611
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.
       0.599
CSIRO_1104
ATP-dependent nuclease subunit B.
  
     0.583
CSIRO_0948
DNA polymerase III delta subunit.
  
     0.576
CSIRO_1031
Putative zinc-dependent oxidoreductase.
       0.574
CSIRO_0857
Hypothetical protein.
  
     0.572
CSIRO_1034
Hypothetical protein.
       0.566
CSIRO_2586
Hypothetical protein.
  
     0.563
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.