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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1055Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (251 aa)    
Predicted Functional Partners:
CSIRO_2425
Biotin carboxylase.
   
 
  0.668
CSIRO_1054
long-chain-fatty-acid--CoA ligase.
 
 
  0.638
xylB
Xylulose kinase.
    
  0.617
CSIRO_3681
Low-specificity L-threonine aldolase.
    
  0.604
CSIRO_1613
Dehydrogenase.
  
  
  0.531
CSIRO_1731
3-oxoacyl-(acyl-carrier protein) reductase.
 
  
 
0.459
CSIRO_0761
Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 
0.447
CSIRO_3242
Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein.
 
  
  0.446
CSIRO_1185
Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 
0.440
CSIRO_2616
3-oxoacyl-(acyl-carrier protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 
0.439
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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