Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSIRO_1101Hypothetical protein. (246 aa)    
Predicted Functional Partners:
CSIRO_1100
Dihydrofolate synthase/ Folylpolyglutamate synthase; Bifunctional; Belongs to the folylpolyglutamate synthase family.
       0.808
CSIRO_0317
Hypothetical protein.
  
 
 0.796
accD
Acetyl-coenzyme A carboxyl transferase beta chain; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.
       0.667
CSIRO_0632
Hypothetical protein.
    
  0.533
CSIRO_0727
Nucleoside-diphosphate-sugar epimerase.
    
  0.533
CSIRO_1725
UDP-glucose 4-epimerase.
    
  0.533
CSIRO_2269
Hypothetical protein.
    
  0.533
CSIRO_2802
Hypothetical protein.
    
  0.533
CSIRO_3836
NAD-dependent epimerase/dehydratase.
    
  0.533
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.
    
  0.533
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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