Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CSIRO_0272 | CSIRO_3842 | CSIRO_0272 | CSIRO_3842 | TPR domain-containing protein. | Glycosyltransferase. | 0.418 |
| CSIRO_0272 | ubiB | CSIRO_0272 | CSIRO_1111 | TPR domain-containing protein. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.660 |
| CSIRO_0272 | ubiE | CSIRO_0272 | CSIRO_1112 | TPR domain-containing protein. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family. | 0.417 |
| CSIRO_0439 | ubiB | CSIRO_0439 | CSIRO_1111 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.619 |
| CSIRO_1110 | ubiB | CSIRO_1110 | CSIRO_1111 | Phosphopantothenoylcysteine decarboxylase/ phosphopantothenoylcysteine synthetase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.729 |
| CSIRO_1110 | ubiE | CSIRO_1110 | CSIRO_1112 | Phosphopantothenoylcysteine decarboxylase/ phosphopantothenoylcysteine synthetase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family. | 0.697 |
| CSIRO_1943 | nuoC | CSIRO_1943 | CSIRO_2719 | Tungsten-containing formate dehydrogenase beta subunit. | NADH-ubiquinone oxidoreductase chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.999 |
| CSIRO_1943 | ubiB | CSIRO_1943 | CSIRO_1111 | Tungsten-containing formate dehydrogenase beta subunit. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.727 |
| CSIRO_3304 | ubiB | CSIRO_3304 | CSIRO_1111 | Porphobilinogen synthase; Belongs to the ALAD family. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.682 |
| CSIRO_3842 | CSIRO_0272 | CSIRO_3842 | CSIRO_0272 | Glycosyltransferase. | TPR domain-containing protein. | 0.418 |
| CSIRO_3842 | ubiB | CSIRO_3842 | CSIRO_1111 | Glycosyltransferase. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.622 |
| CSIRO_3842 | ubiE | CSIRO_3842 | CSIRO_1112 | Glycosyltransferase. | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family. | 0.459 |
| CSIRO_3861 | ubiB | CSIRO_3861 | CSIRO_1111 | Hypothetical protein. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.713 |
| nuoC | CSIRO_1943 | CSIRO_2719 | CSIRO_1943 | NADH-ubiquinone oxidoreductase chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | Tungsten-containing formate dehydrogenase beta subunit. | 0.999 |
| nuoC | ubiB | CSIRO_2719 | CSIRO_1111 | NADH-ubiquinone oxidoreductase chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.643 |
| ubiB | CSIRO_0272 | CSIRO_1111 | CSIRO_0272 | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | TPR domain-containing protein. | 0.660 |
| ubiB | CSIRO_0439 | CSIRO_1111 | CSIRO_0439 | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.619 |
| ubiB | CSIRO_1110 | CSIRO_1111 | CSIRO_1110 | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | Phosphopantothenoylcysteine decarboxylase/ phosphopantothenoylcysteine synthetase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.729 |
| ubiB | CSIRO_1943 | CSIRO_1111 | CSIRO_1943 | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | Tungsten-containing formate dehydrogenase beta subunit. | 0.727 |
| ubiB | CSIRO_3304 | CSIRO_1111 | CSIRO_3304 | Ubiquinone biosynthesis monooxygenase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.682 |
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