STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1117Hypothetical protein. (175 aa)    
Predicted Functional Partners:
CSIRO_1104
ATP-dependent nuclease subunit B.
  
     0.682
CSIRO_0864
Glutathione S-transferase-like protein.
  
     0.670
CSIRO_4034
Hypothetical protein.
  
     0.648
CSIRO_0647
DnaJ-like domain-containing protein.
  
     0.646
CSIRO_1381
Hypothetical protein.
  
     0.618
recO
DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.617
CSIRO_0384
Hypothetical protein; Belongs to the UPF0335 family.
  
     0.609
CSIRO_0934
Transporter.
  
     0.601
CSIRO_0636
CarD-like transcriptional regulator.
  
     0.584
atpF-2
ATP synthase B' chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.544
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.