Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_1147Putative molecular chaperone. (228 aa)    
Predicted Functional Partners:
CSIRO_1107
Putative phosphotransferase.
 
 0.996
tsaD
YgjD/Kae1/Qri7-like protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.982
CSIRO_1146
ribosomal-protein-S18p-alanine acetyltransferase.
 
 0.933
CSIRO_1804
YrdC/Sua5 family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
    
 0.887
CSIRO_1144
HAD-superfamily hydrolase subfamily IA, variant 3.
       0.738
mur
Manganese uptake regulation protein Mur; Belongs to the Fur family.
       0.705
corC
Magnesium and cobalt efflux protein CorC.
 
    0.683
CSIRO_2596
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
  
 0.681
CSIRO_1142
Putative PhoH-like phosphate starvation-inducible protein.
 
     0.675
nifU
NifU protein.
     
 0.641
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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