STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1181Isoquinoline 1-oxidoreductase alpha subunit. (163 aa)    
Predicted Functional Partners:
CSIRO_1182
Isoquinoline 1-oxidoreductase beta subunit.
 0.984
CSIRO_3519
Isoquinoline 1-oxidoreductase beta subunit.
 0.949
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
 0.933
CSIRO_3830
Xanthine dehydrogenase family protein, large subunit.
 
 0.933
CSIRO_1950
Carbon monoxide dehydrogenase large chain.
 0.918
CSIRO_0776
Carbon monoxide dehydrogenase large chain.
 
 0.899
CSIRO_0046
Carbon monoxide dehydrogenase large chain.
 0.881
CSIRO_0728
Carbon monoxide dehydrogenase large chain.
 0.856
CSIRO_2547
Carbon monoxide dehydrogenase large chain.
 0.833
CSIRO_3646
Carbon monoxide dehydrogenase F protein.
 
 
 0.801
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.