Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1200Hypothetical protein. (391 aa)    
Predicted Functional Partners:
CSIRO_4286
Adenylate cyclase.
  
     0.739
CSIRO_1044
Adenylate cyclase/ guanylate cyclase; Bifunctional.
  
     0.724
CSIRO_1838
Adenylate cyclase/ guanylate cyclase; Bifunctional.
  
     0.714
CSIRO_1201
Hypothetical protein.
       0.680
CSIRO_1205
Putative metal chaperone; Involved in zinc homeostasis.
 
     0.580
CSIRO_1202
Hypothetical protein.
       0.576
CSIRO_1204
Cobalt-containing nitrile hydratase subunit beta; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
 
     0.567
CSIRO_4155
Adenylate cyclase.
  
     0.555
CSIRO_1199
Hypothetical protein.
       0.528
CSIRO_1203
Cobalt-containing nitrile hydratase subunit alpha.
 
     0.527
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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