STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1221Hypothetical protein. (142 aa)    
Predicted Functional Partners:
CSIRO_1289
Hypothetical protein.
      0.639
CSIRO_1753
Glycosyl transferase.
  
    0.579
CSIRO_0557
Phosphoglucosamine mutase/ Phosphomannomutase; Bifunctional.
  
  
  0.545
CSIRO_1411
Nitroreductase-like protein.
  
     0.545
CSIRO_1220
Transpeptidase-transglycosylase; Bifunctional.
       0.498
CSIRO_0713
acyl-CoA dehydrogenase family protein.
  
     0.495
CSIRO_1911
Nitroreductase.
  
     0.492
CSIRO_3690
Hypothetical protein.
  
     0.491
CSIRO_2258
Fatty acid desaturase.
  
     0.476
CSIRO_3386
Hypothetical protein.
  
     0.417
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.