STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1225Putative cytochrome C-type biogenesis protein. (244 aa)    
Predicted Functional Partners:
CSIRO_1224
Hypothetical protein.
  
 0.985
CSIRO_1226
Putative energy transducer TonB.
       0.517
ccmC
Cytochrome c-type biogenesis protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.473
CSIRO_1228
MotA/TolQ/ExbB proton channel family protein.
  
    0.466
CSIRO_1227
Biopolymer transport protein ExbD/TolR.
       0.454
CSIRO_1229
Hypothetical protein.
       0.452
CSIRO_0124
Hypothetical protein.
   
    0.442
ccmG
Cytochrome c-type biogenesis protein CcmG.
 
  
 0.442
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.