Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CSIRO_1232TonB-dependent siderophore receptor. (812 aa)    
Predicted Functional Partners:
piuC
Iron-uptake factor PiuC.
 
  
 0.976
CSIRO_1231
Hypothetical protein.
 
  
 0.769
CSIRO_1228
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.752
CSIRO_1227
Biopolymer transport protein ExbD/TolR.
  
 
 0.695
CSIRO_1226
Putative energy transducer TonB.
 
  
 0.675
CSIRO_3225
Putative high-affinity iron permease.
   
  
 0.641
tolQ
MotA/TolQ/ExbB proton channel family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.592
CSIRO_1230
TonB-dependent receptor.
 
  
 0.577
CSIRO_0484
Biopolymer transport protein ExbD/TolR.
  
 
 0.572
CSIRO_0483
TolA protein.
    
 0.492
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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