Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_1236Isochorismatase. (232 aa)    
Predicted Functional Partners:
CSIRO_1234
Allophanate hydrolase.
  
 0.995
CSIRO_1235
Hypothetical protein.
 
  
  0.950
CSIRO_1729
Anthranilate synthase.
    
 0.780
CSIRO_2029
Amidase.
   
 0.751
CSIRO_1640
Hypothetical protein.
  
 
 0.707
CSIRO_3310
Endoribonuclease L-PSP.
  
 
 0.707
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
     
 0.682
CSIRO_0039
Amidase; Belongs to the amidase family.
    
 0.681
CSIRO_2077
Isoquinoline 1-oxidoreductase beta subunit.
     
 0.657
nnrD
Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]
   
    0.626
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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