Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_1245benzoate-CoA ligase. (520 aa)    
Predicted Functional Partners:
aroK-2
Benzoate catabolism regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
  
 0.904
CSIRO_1246
Benzoate degradation ring-cleavage hydrolase.
 
  
  0.887
CSIRO_1247
benzoyl-CoA-dihydrodiol lyase.
 
 0.882
CSIRO_1249
Benzoyl-CoA oxygenase.
 
 
 0.840
CSIRO_1248
Benzoyl-CoA oxygenase.
 
  
 0.833
CSIRO_0979
Putative 2-pyrone-4,6-dicarboxylic acid hydrolase.
  
  
 0.811
CSIRO_2662
NAD-dependent malic enzyme.
  
 0.807
CSIRO_2425
Biotin carboxylase.
  
 0.777
CSIRO_1422
P-hydroxybenzoate hydroxylase.
   
 
  0.770
CSIRO_2212
Amidase.
   
 
  0.770
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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