STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1265Lipolytic enzyme. (285 aa)    
Predicted Functional Partners:
opgC
OpgC protein.
 
     0.872
CSIRO_1264
Lipolytic enzyme.
 
    
0.761
CSIRO_2382
Hypothetical protein.
 
 
 0.691
CSIRO_0545
Putative acyl-CoA thioesterase precursor.
  
  
  0.643
CSIRO_0821
Arylesterase precursor.
  
  
 
0.635
CSIRO_3040
Hypothetical protein.
 
     0.616
CSIRO_3943
Tricarboxylate transport protein.
  
     0.584
CSIRO_2434
Hypothetical protein.
  
 0.560
CSIRO_2374
Hypothetical protein.
   
 0.555
CSIRO_2377
Hypothetical protein.
   
 0.555
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.