Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_1284ABC transporter. (289 aa)    
Predicted Functional Partners:
CSIRO_3010
Amino acid ABC transporter, permease protein.
 
 0.927
CSIRO_3009
ABC transporter related protein.
 
 0.908
CSIRO_3011
ABC-type amino acid transport system periplasmic component.
 
 
 0.893
CSIRO_2365
Sensory box histidine kinase/response regulator.
   
 0.871
CSIRO_4010
ABC transporter permease protein.
     
 0.867
CSIRO_1285
Integral membrane protein.
    
 0.845
CSIRO_2900
ABC transporter, periplasmic substrate-binding protein.
  
 
 0.801
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
    
 0.753
lysS
lysyl-tRNA synthetase (class I); Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.748
znuB
Zinc ABC transporter inner membrane permease protein ZnuB.
  
  
 0.746
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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