STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1285Integral membrane protein. (216 aa)    
Predicted Functional Partners:
CSIRO_1284
ABC transporter.
  
 
  0.816
lysS
lysyl-tRNA synthetase (class I); Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.713
CSIRO_4093
Hypothetical protein.
   
 
 0.672
CSIRO_1287
YbaK family protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.665
CSIRO_2234
Cytochrome P450.
    
 0.600
CSIRO_2676
Rrf2-linked NADH-flavin reductase.
 
  
  0.598
arsH
Arsenic resistance protein ArsH.
  
 0.568
CSIRO_0887
Hypothetical protein.
  
 0.568
CSIRO_1580
Hypothetical protein.
  
 0.568
CSIRO_2694
NADPH-dependent FMN reductase.
  
 0.568
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.