STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1301Putative transmembrane protein. (260 aa)    
Predicted Functional Partners:
CSIRO_1302
Protein of unknown function DUF81.
 
     0.952
CSIRO_1149
Universal stress protein UspA-like protein.
 
     0.801
CSIRO_0642
Hypothetical protein.
  
     0.584
CSIRO_2767
ComEC/Rec2-related protein.
  
     0.496
CSIRO_0219
Hypothetical protein.
  
     0.492
CSIRO_1303
Hypothetical protein.
       0.473
CSIRO_0583
HPr kinase.
  
     0.442
ccoH
Cytochrome c oxidase biogenesis protein CcoH.
  
     0.441
CSIRO_0878
Hypothetical protein.
  
     0.432
CSIRO_2302
DNA replication/repair protein.
  
     0.428
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.