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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1313Putative thioredoxin. (132 aa)    
Predicted Functional Partners:
CSIRO_3414
Alkyl hydroperoxide reductase subunit C-like protein.
  
 0.975
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.960
msrA-2
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.960
CSIRO_1943
Tungsten-containing formate dehydrogenase beta subunit.
  
 
 0.909
CSIRO_1314
Cytochrome c-type biogenesis protein CcdA.
 
  
 0.906
CSIRO_1282
Putative copper metallochaperone.
  
 
 0.886
CSIRO_1386
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.876
CSIRO_0811
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase.
   
 0.860
CSIRO_2453
Glutathione reductase; Maintains high levels of reduced glutathione.
   
 0.860
CSIRO_2816
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex.
   
 0.860
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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