Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1346Hypothetical protein. (715 aa)    
Predicted Functional Partners:
cheA
Signal transduction histidine kinase CheA.
 
 0.987
cheW
Regulator of CheA protein activity CheW.
 
 0.972
CSIRO_2365
Sensory box histidine kinase/response regulator.
 
 0.968
cheR
Chemotaxis protein methyltransferase CheR.
 
 0.918
cheB
Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.909
CSIRO_4010
ABC transporter permease protein.
     
 0.842
CSIRO_4108
Hypothetical protein.
  
 0.838
CSIRO_0257
Chemotaxis regulator.
 
 0.819
CSIRO_4257
Chemotaxis regulator.
  
  0.817
CSIRO_0454
Hypothetical protein.
 
 0.794
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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