STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1394ABC-type multidrug transport system. (619 aa)    
Predicted Functional Partners:
CSIRO_4010
ABC transporter permease protein.
     
  0.840
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.776
CSIRO_2465
HlyB/MsbA-like ABC transporter.
  
 
0.752
CSIRO_4212
SN-glycerol-3-phosphate transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.702
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
  0.686
CSIRO_2070
Putative dipeptide ABC transporter; Belongs to the ABC transporter superfamily.
    
 0.684
CSIRO_1723
Ubiquinol--cytochrome c reductase cytochrome B subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.681
CSIRO_3816
ABC-type transport system permease; Involved in resistance to organic solvents.
 
 
  0.681
znuB
Zinc ABC transporter inner membrane permease protein ZnuB.
     
 0.679
potG
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
     
  0.671
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.