Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1402long-chain-fatty-acid--CoA ligase. (517 aa)    
Predicted Functional Partners:
CSIRO_1409
acyl-CoA dehydrogenase-like protein.
 
 
  0.876
CSIRO_1410
Putative acyl-CoA dehydrogenase.
 
 
  0.875
CSIRO_2098
acyl-CoA dehydrogenase, short-chain specific.
  
 
  0.867
CSIRO_1440
long-chain-fatty-acid--CoA ligase.
  
  
 
0.823
CSIRO_1852
acyl-CoA dehydrogenase.
   
 
  0.821
CSIRO_4277
acyl-CoA dehydrogenase, short-chain specific.
   
 
  0.821
CSIRO_1305
acyl-CoA dehydrogenase.
   
 
  0.818
CSIRO_2097
acyl-CoA dehydrogenase, long-chain specific.
  
 
  0.813
CSIRO_3536
acyl-CoA dehydrogenase.
   
 
  0.801
CSIRO_3955
long-chain-fatty-acid--CoA ligase.
  
  
 
0.791
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.