Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_1411Nitroreductase-like protein. (230 aa)    
Predicted Functional Partners:
CSIRO_1410
Putative acyl-CoA dehydrogenase.
 
     0.858
CSIRO_1512
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
 
 0.825
CSIRO_1409
acyl-CoA dehydrogenase-like protein.
       0.812
CSIRO_1408
feruloyl-CoA synthetase.
   
   0.658
CSIRO_1412
Haloalkane dehalogenase.
  
 
  0.627
CSIRO_1405
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
 
 
  0.584
CSIRO_1221
Hypothetical protein.
  
     0.545
CSIRO_1217
Hypothetical protein.
  
  
 0.534
CSIRO_3640
Nitrate ABC transporter permease.
  
  
 0.534
CSIRO_4048
ABC-type multidrug transport system, permease component.
  
  
 0.534
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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