STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_1435High-affinity branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
CSIRO_1434
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
  0.986
CSIRO_1437
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
 
 
  0.966
CSIRO_1436
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name.
 
  0.958
CSIRO_1433
Hypothetical protein.
 
 
  0.929
CSIRO_2005
ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.923
CSIRO_1432
Ligand-binding receptor.
 
 
  0.906
CSIRO_1431
Putative ABC-type branched-chain amino acid transporter.
 
 
  0.899
CSIRO_3969
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.888
CSIRO_2142
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.877
CSIRO_2213
Hypothetical protein.
  
 
  0.876
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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